High Performance Analytics & Computing Platform – Guidebook

Infos and documentation of the HBP's HPAC Platform

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Parallel programming & High Performance Computing

Introduction to HPC and parallel programming

Introduction to Parallel Computing
Language: English
Access: free download
Available at: http://www.fz-juelich.de/SharedDocs/Downloads/IAS/JSC/EN/slides/parallel-computing.pdf

Parallel programming with MPI and OpenMP
Language: English
Access: free downloads
Available at: http://www.fz-juelich.de/ias/jsc/DE/Leistungen/Dienstleistungen/Dokumentation/Praesentationen/folien-mpi-openmp_table.html?nn=2222554

Message Passing Interface (MPI)

Training MPI
Language: English
Access: free (online exercises and downloads)
Available at: http://www.hpc.cineca.it/content/training-mpi

Material of Introduction to MPI
Language: English
Access: free download
Available at: http://www.hpc.cineca.it/sites/default/files/MPI.zip

OpenMP

Training OpenMP
Language: English
Access: free (online exercises and downloads)
Available at: http://www.hpc.cineca.it/content/training-openmp

Material of OpenMP training
Language: English
Access: free download
Available at: http://www.hpc.cineca.it/sites/default/files/OpenMP.zip

Hybrid parallelization and GPGPU

Code parallelization and hybridization
Language: English
Access: free (online exercises and downloads)
Available at: http://www.hpc.cineca.it/content/code-parallelizationhybridization

Material of GPU and CUDA course
Language: English
Access: free download
Available at: http://www.hpc.cineca.it/sites/default/files/CUDAcourse.zip

GPU programming
Language: English
Access: free downloads
Available at: http://www.fz-juelich.de/ias/jsc/EN/Expertise/Services/Documentation/presentations/presentation-gpu_table.html

Advanced GPU programming
Language: English
Access: free downloads
Available at: http://www.fz-juelich.de/ias/jsc/EN/Expertise/Services/Documentation/presentations/presentation-adv-gpu_table.html

HPC architectures

Material: Tools and techniques for scientific programming on BG/Q
Language: English
Access: free download
Available at: http://www.hpc.cineca.it/sites/default/files/presentations-3.zip

Material: Tools and techniques for scientific programming on FERMI
Language: English
Access: free download
Available at: http://www.hpc.cineca.it/sites/default/files/presentations-2.zip

Material: Tools and techniques for scientific programming in HPC environments
Language: English
Access: free download
Available at: http://www.hpc.cineca.it/sites/default/files/CorsoProgrammazioneScientifica2012.zip

Introduction to the programming and usage of the supercomputer resources in Jülich
Language: English
Access: free downloads
Available at: http://www.fz-juelich.de/ias/jsc/DE/Leistungen/Dienstleistungen/Dokumentation/Praesentationen/folien-sc-2017-11_table.html?nn=2022346

JUQUEEN Porting and Tuning Workshops
Language: English
Access: free downloads
Available at:
http://www.fz-juelich.de/ias/jsc/EN/Expertise/Services/Documentation/presentations/presentation-juqueenpt13_table.html
http://www.fz-juelich.de/ias/jsc/EN/Expertise/Services/Documentation/presentations/presentation-juqueenpt14_table.html

Introduction to the Blue Gene/Q Architecture
Language: English
Access: free downloads
Available at: http://www.fz-juelich.de/ias/jsc/EN/Expertise/Services/Documentation/presentations/slides_juqueen_ws_table.html

More HPC topics

Parallel I/O and Portable Data Formats
Language: English
Access: free downloads
Available at: http://www.fz-juelich.de/ias/jsc/DE/Leistungen/Dienstleistungen/Dokumentation/Praesentationen/folien-parallelio-2018_table.html?nn=2222554

UNICORE – Unified Access to resources at JSC
Original title: UNICORE – Einheitlicher Zugang zu JSC-Ressourcen
Language: German
Access: free download
Available at: http://www.fz-juelich.de/SharedDocs/Downloads/IAS/JSC/EN/slides/unicore.pdf

Numerical libraries for HPC
Language: English
Access: free (online exercises and downloads)
Available at: http://www.hpc.cineca.it/content/numerical-libraries

This project has received funding from the European Union Seventh Framework Programme (FP7/2007-2013) under grant agreement no. 604102 (Human Brain Project), and from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreements No. 20270 (Human Brain Project SGA1) and No. 785907 (Human Brain Project SGA2).

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This website describes the results of the “High Performance Analytics and Computing” (HPAC) Platform of the Human Brain Project (HBP) from the first three project phases (Ramp-up Phase 10/2013-03/2016, SGA1 04/2016-03/2018 and SGA2 04/2018-03/2020).

Due to a major project-internal reorganisation, this website will no longer be updated after March 2020.

More recent information can be found on humanbrainproject.eu and ebrains.eu.
Information about the Fenix Research Infrastructure and the ICEI project, including resource access, are available on their website.

Follow EBRAINS Computing Services @HBPHighPerfComp and Fenix RI @Fenix_RI_eu on Twitter to learn about the most recent developments and to get to know about upcoming opportunities for calls and collaborations!